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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11988428 chr8:20840852 A/G CNOT7 chr8:17082473-17104387:- 0.76 6.17 1.73E-9 Box Plot
BLCA rs11988428 chr8:20840852 A/G DCTN6 chr8:30013813-30041156:+ 0.76 6.13 2.24E-9 Box Plot
BLCA rs11988428 chr8:20840852 A/G ELP3 chr8:27947190-28048673:+ 0.93 7.29 1.83E-12 Box Plot
BLCA rs11988428 chr8:20840852 A/G FAM160B2 chr8:21946670-21962409:+ 0.69 6.49 2.7E-10 Box Plot
BLCA rs11988428 chr8:20840852 A/G INTS10 chr8:19674651-19709594:+ 0.73 6 4.54E-9 Box Plot
BLCA rs11988428 chr8:20840852 A/G INTS9 chr8:28625178-28747759:- 0.81 6.35 6.22E-10 Box Plot
BLCA rs11988428 chr8:20840852 A/G KIAA1967 chr8:22462257-22477981:+ 0.82 6.61 1.29E-10 Box Plot
BLCA rs11988428 chr8:20840852 A/G PPP2R2A chr8:26149007-26230196:+ 0.7 5.99 4.72E-9 Box Plot
BLCA rs11988428 chr8:20840852 A/G R3HCC1 chr8:23127633-23153792:+ 0.71 6.33 6.87E-10 Box Plot
BLCA rs11989014 chr8:13361425 C/T CCDC25 chr8:27590828-27630170:- -0.71 -6.11 2.42E-9 Box Plot
BLCA rs11989414 chr8:14636322 G/T CHMP7 chr8:23101150-23119513:+ -0.64 -6.08 2.9E-9 Box Plot
BLCA rs11989414 chr8:14636322 G/T CNOT7 chr8:17082473-17104387:- -0.69 -6.35 6.2E-10 Box Plot
BLCA rs11989414 chr8:14636322 G/T FAM160B2 chr8:21946670-21962409:+ -0.6 -6.31 7.88E-10 Box Plot
BLCA rs11989414 chr8:14636322 G/T INTS10 chr8:19674651-19709594:+ -0.71 -6.7 7.37E-11 Box Plot
BLCA rs11989414 chr8:14636322 G/T KIAA1967 chr8:22462257-22477981:+ -0.67 -6.09 2.67E-9 Box Plot